454 whole genome shotgun sequencing of genomic DNA library '454-1829'... - SRA

SRX004454: 454 whole genome shotgun sequencing of genomic DNA library '454-1829' containing sample 'BROAD:SEQUENCING_SAMPLE:17349.0'
1 LS454 (454 GS FLX) run: 99,813 spots, 28.3M bases, 56.2Mb downloads

UUID: 6f827feb-5d17-4bfd-92f6-74f031f18005

Design: 15x fragment; 30x physical paired

Submitted by: Broad Institute (BI)

Study: Reference Genome for the Human Microbiome Project

PRJNA40049 • SRP001644 • All experiments • All runs

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<b><i>Klebsiella</i> sp. 1_1_55</b>. This strain will be used for comparative genome analysis.

Sample: Generic sample from Klebsiella sp. 1_1_55

SAMN00102974 • SRS002810 • All experiments • All runs

Organism: Klebsiella variicola

Library:

Name: 454-1829

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
	CGGTCTTC

13 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: Assembly

gssr_id: 17349.1

lsid: BROAD:SEQUENCING_SAMPLE:17349.1

material_type: Genomic DNA

project: G1755

work_request: 18384

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-03-14 18:15:35.0	454BaseCaller	2.0.00.17

Runs: 1 run, 99,813 spots, 28.3M bases, 56.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR015893	99,813	28.3M	56.2Mb	2009-05-13

ID:: 4710

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Sequence Read Archive

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